Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rtec protein | SAMN04487898_122105 | Not Available | Negative | 6092357 - 6093214 | 33818.7 |
| carboxyl-terminal processing protease | SAMN04487898_122106 | Not Available | Negative | 6094144 - 6096204 | 76394.6 |
| peroxiredoxin | SAMN04487898_122107 | Not Available | Negative | 6096212 - 6097591 | 50760.5 |
| hypothetical protein | SAMN04487898_122108 | Not Available | Negative | 6097542 - 6097778 | 9144.05 |
| rna-directed dna polymerase | SAMN04487898_122110 | Not Available | Negative | 6097775 - 6099100 | 51229.6 |
| sh3 domain-containing protein | SAMN04487898_1231 | Not Available | Negative | 6099902 - 6100324 | 15349.8 |
| bon domain-containing protein | SAMN04487898_1232 | Not Available | Negative | 6100340 - 6100843 | 17244.1 |
| rna polymerase primary sigma factor | SAMN04487898_1233 | Not Available | Positive | 6101217 - 6102080 | 32370.2 |
| chemotaxis protein motb | SAMN04487898_1234 | Not Available | Positive | 6102147 - 6103004 | 31732.8 |
| atp-dependent rna helicase rhle | SAMN04487898_1235 | Not Available | Negative | 6103095 - 6104402 | 48048.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

