Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_10227 | Not Available | Negative | 639923 - 640261 | 12868.7 |
| hypothetical protein | SAMN04487898_10228 | Not Available | Positive | 640461 - 641699 | 46222.3 |
| propionyl-coa carboxylase beta chain | SAMN04487898_10229 | Not Available | Positive | 641736 - 643277 | 56318.4 |
| predicted arabinose efflux permease, mfs family | SAMN04487898_10230 | Not Available | Positive | 643277 - 644440 | 42315.3 |
| acetyltransferase (gnat) domain-containing protein | SAMN04487898_10231 | Not Available | Positive | 644446 - 644862 | 15787.1 |
| putative aminopeptidase frvx | SAMN04487898_10232 | Not Available | Positive | 644916 - 646031 | 41557.7 |
| hypothetical protein | SAMN04487898_10233 | Not Available | Positive | 646146 - 647690 | 55799.4 |
| nucleotidyl transferase | SAMN04487898_10234 | Not Available | Positive | 647789 - 648688 | 33934.2 |
| molecular chaperone dnak | SAMN04487898_10235 | Not Available | Negative | 648763 - 650676 | 68546.0 |
| methyltransferase domain-containing protein | SAMN04487898_10236 | Not Available | Negative | 650849 - 652060 | 45796.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

