Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_10113 | Not Available | Negative | 17497 - 17697 | 7894.13 |
| glycosyl-hydrolase 97 c-terminal, oligomerisation | SAMN04487898_10114 | Not Available | Positive | 17931 - 19883 | 72731.1 |
| signal transduction histidine kinase | SAMN04487898_10115 | Not Available | Positive | 19915 - 23937 | 151118.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_10116 | Not Available | Positive | 24044 - 27169 | 116407.0 |
| starch-binding associating with outer membrane | SAMN04487898_10117 | Not Available | Positive | 27199 - 29028 | 69351.9 |
| protein of unknown function | SAMN04487898_10118 | Not Available | Positive | 29040 - 29717 | 24837.6 |
| beta-xylosidase | SAMN04487898_10119 | Not Available | Positive | 29727 - 31649 | 73016.2 |
| protein of unknown function | SAMN04487898_10120 | Not Available | Positive | 31663 - 34155 | 93038.4 |
| npcbm-associated, new3 domain of alpha-galactosidase | SAMN04487898_10121 | Not Available | Positive | 34364 - 35221 | 30896.0 |
| abc-2 type transport system atp-binding protein | SAMN04487898_10122 | Not Available | Positive | 35226 - 36173 | 35196.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

