Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_12283 | Not Available | Negative | 6075518 - 6075787 | 10593.7 |
| dna-directed rna polymerase specialized sigma subunit, sigma24 family | SAMN04487898_12284 | Not Available | Positive | 6076157 - 6076783 | 24568.8 |
| type i restriction enzyme, s subunit/type i restriction enzyme m protein | SAMN04487898_12285 | Not Available | Positive | 6076761 - 6077483 | 28580.4 |
| hypothetical protein | SAMN04487898_12286 | Not Available | Negative | 6077557 - 6077739 | 6517.74 |
| hypothetical protein | SAMN04487898_12287 | Not Available | Negative | 6077798 - 6079219 | 54466.5 |
| hypothetical protein | SAMN04487898_12288 | Not Available | Negative | 6079250 - 6080299 | 39059.1 |
| bacteroides conjugative transposon tram protein | SAMN04487898_12289 | Not Available | Negative | 6080299 - 6081378 | 38935.5 |
| hypothetical protein | SAMN04487898_12290 | Not Available | Negative | 6081412 - 6081633 | 8332.51 |
| bacteroides conjugative transposon trak protein | SAMN04487898_12291 | Not Available | Negative | 6081630 - 6082256 | 24014.8 |
| bacteroides conjugative transposon traj protein | SAMN04487898_12292 | Not Available | Negative | 6082268 - 6083473 | 43971.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

