Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific recombinase xerd | SAMN04487898_12273 | Not Available | Positive | 6065744 - 6067006 | 48199.3 |
| site-specific recombinase xerd | SAMN04487898_12274 | Not Available | Positive | 6067003 - 6067992 | 37875.4 |
| site-specific recombinase xerd | SAMN04487898_12275 | Not Available | Positive | 6067964 - 6068992 | 39524.5 |
| arsenite transporter, acr3 family | SAMN04487898_12276 | Not Available | Negative | 6069078 - 6070157 | 39689.9 |
| arsenate reductase | SAMN04487898_12277 | Not Available | Negative | 6070160 - 6070792 | 23604.9 |
| hypothetical protein | SAMN04487898_12278 | Not Available | Negative | 6070804 - 6071271 | 17079.6 |
| regulatory protein, arsr family | SAMN04487898_12279 | Not Available | Negative | 6071328 - 6071657 | 11851.6 |
| hypothetical protein | SAMN04487898_12280 | Not Available | Positive | 6072076 - 6072495 | 16475.2 |
| hypothetical protein | SAMN04487898_12281 | Not Available | Negative | 6072692 - 6074371 | 64664.5 |
| hypothetical protein | SAMN04487898_12282 | Not Available | Negative | 6074374 - 6075516 | 43775.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

