Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04487898_12263 | Not Available | Negative | 6058650 - 6059798 | 42553.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_12264 | Not Available | Negative | 6059891 - 6060466 | 22018.8 |
| hypothetical protein | SAMN04487898_12265 | Not Available | Negative | 6060971 - 6061552 | 22075.2 |
| hypothetical protein | SAMN04487898_12266 | Not Available | Negative | 6061564 - 6062049 | 18833.5 |
| hypothetical protein | SAMN04487898_12267 | Not Available | Negative | 6061991 - 6062359 | 14660.8 |
| hypothetical protein | SAMN04487898_12268 | Not Available | Negative | 6062407 - 6062625 | 8557.37 |
| phage/plasmid-like protein tigr03299 | SAMN04487898_12269 | Not Available | Negative | 6062668 - 6063747 | 40422.7 |
| hypothetical protein | SAMN04487898_12270 | Not Available | Negative | 6063759 - 6063932 | 6605.8 |
| hypothetical protein | SAMN04487898_12271 | Not Available | Negative | 6064122 - 6064676 | 20306.1 |
| hypothetical protein | SAMN04487898_12272 | Not Available | Negative | 6064979 - 6065590 | 22449.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

