Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_12253 | Not Available | Negative | 6043784 - 6044383 | 23081.7 |
| hypothetical protein | SAMN04487898_12254 | Not Available | Negative | 6044558 - 6044893 | 12809.0 |
| subtilase family protein | SAMN04487898_12255 | Not Available | Negative | 6044963 - 6046552 | 57659.8 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN04487898_12256 | Not Available | Negative | 6046591 - 6048720 | 80875.3 |
| thioredoxin-like | SAMN04487898_12257 | Not Available | Negative | 6048726 - 6049814 | 41505.2 |
| thioredoxin-like | SAMN04487898_12258 | Not Available | Negative | 6049831 - 6050973 | 43917.8 |
| thioredoxin | SAMN04487898_12259 | Not Available | Negative | 6050993 - 6052153 | 44113.0 |
| hypothetical protein | SAMN04487898_12260 | Not Available | Negative | 6052223 - 6053161 | 34747.8 |
| starch-binding associating with outer membrane | SAMN04487898_12261 | Not Available | Negative | 6053187 - 6054749 | 58727.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_12262 | Not Available | Negative | 6054761 - 6058333 | 131617.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

