Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose mutarotase | SAMN04487898_12243 | Not Available | Positive | 6028197 - 6028532 | 13035.6 |
| d-threo-aldose 1-dehydrogenase | SAMN04487898_12244 | Not Available | Positive | 6028536 - 6029570 | 38427.1 |
| predicted zn-dependent peptidase | SAMN04487898_12245 | Not Available | Negative | 6029782 - 6031335 | 57900.7 |
| glpgli family protein | SAMN04487898_12246 | Not Available | Negative | 6031387 - 6032196 | 31112.9 |
| subtilase family protein | SAMN04487898_12247 | Not Available | Negative | 6032224 - 6033798 | 58757.2 |
| protein of unknown function | SAMN04487898_12248 | Not Available | Negative | 6033798 - 6036233 | 93180.9 |
| hypothetical protein | SAMN04487898_12249 | Not Available | Negative | 6036262 - 6037188 | 34703.8 |
| susd family protein | SAMN04487898_12250 | Not Available | Negative | 6037220 - 6038707 | 55900.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_12251 | Not Available | Negative | 6038718 - 6042368 | 136078.0 |
| fecr family protein | SAMN04487898_12252 | Not Available | Negative | 6042541 - 6043707 | 42769.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

