Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein tolc | SAMN04487898_12213 | Not Available | Positive | 5984388 - 5985761 | 52126.1 |
| rnd family efflux transporter, mfp subunit | SAMN04487898_12214 | Not Available | Positive | 5985767 - 5986813 | 37483.1 |
| multidrug efflux pump subunit acrb | SAMN04487898_12215 | Not Available | Positive | 5986824 - 5989877 | 112305.0 |
| hypothetical protein | SAMN04487898_12216 | Not Available | Positive | 5989939 - 5990712 | 28123.4 |
| uncharacterized domain 1-containing protein | SAMN04487898_12217 | Not Available | Positive | 5990739 - 5991182 | 16709.4 |
| rhodanese-related sulfurtransferase | SAMN04487898_12218 | Not Available | Negative | 5992285 - 5992659 | 14131.5 |
| conserved hypothetical protein, hne_0200 family | SAMN04487898_12219 | Not Available | Negative | 5992694 - 5993677 | 36910.1 |
| integral membrane protein | SAMN04487898_12220 | Not Available | Negative | 5993686 - 5994021 | 12755.1 |
| hypothetical protein | SAMN04487898_12221 | Not Available | Negative | 5994035 - 5994499 | 17921.4 |
| transcriptional regulator, tetr family | SAMN04487898_12222 | Not Available | Negative | 5994548 - 5995132 | 21837.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

