Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_1223 | Not Available | Positive | 5972751 - 5972921 | 6655.44 |
| hypothetical protein | SAMN04487898_1224 | Not Available | Negative | 5973272 - 5973433 | 6220.78 |
| histidine kinase | SAMN04487898_1225 | Not Available | Positive | 5974363 - 5974608 | 9425.37 |
| hypothetical protein | SAMN04487898_1226 | Not Available | Negative | 5975057 - 5976250 | 46331.4 |
| homoserine o-succinyltransferase | SAMN04487898_1227 | Not Available | Positive | 5976720 - 5977664 | 36250.1 |
| hypothetical protein | SAMN04487898_1228 | Not Available | Positive | 5978091 - 5978411 | 11535.1 |
| glpgli family protein | SAMN04487898_1229 | Not Available | Positive | 5978476 - 5979315 | 31300.5 |
| carboxypepd_reg-like domain-containing protein | SAMN04487898_12210 | Not Available | Positive | 5979321 - 5981996 | 100562.0 |
| hypothetical protein | SAMN04487898_12211 | Not Available | Negative | 5982009 - 5983061 | 40626.0 |
| transcriptional regulator, tetr family | SAMN04487898_12212 | Not Available | Positive | 5983734 - 5984342 | 23339.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

