Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nagd protein | SAMN04487898_121116 | Not Available | Negative | 5963328 - 5964101 | 27985.1 |
| predicted oxidoreductase | SAMN04487898_121117 | Not Available | Negative | 5964173 - 5965060 | 33140.8 |
| dna-binding transcriptional regulator, fadr family | SAMN04487898_121118 | Not Available | Positive | 5965215 - 5965871 | 24518.6 |
| mfs transporter, fsr family, fosmidomycin resistance protein | SAMN04487898_121119 | Not Available | Positive | 5965876 - 5967102 | 44282.3 |
| predicted dehydrogenase | SAMN04487898_121120 | Not Available | Positive | 5967148 - 5968458 | 48215.5 |
| dna-binding transcriptional regulator, lrp family | SAMN04487898_121121 | Not Available | Negative | 5968501 - 5969082 | 22365.3 |
| cysteine synthase a | SAMN04487898_121122 | Not Available | Positive | 5969137 - 5970186 | 38051.2 |
| thiol:disulfide interchange protein dsbd | SAMN04487898_121123 | Not Available | Positive | 5970217 - 5970830 | 22064.1 |
| uncharacterized conserved protein ybcv, duf1398 family | SAMN04487898_1221 | Not Available | Positive | 5970831 - 5971448 | 23323.7 |
| glycosyl hydrolase family 20, catalytic domain | SAMN04487898_1222 | Not Available | Negative | 5971701 - 5972483 | 29452.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

