Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose isomerase | SAMN04487898_10217 | Not Available | Negative | 627165 - 628496 | 49806.4 |
| xylulokinase | SAMN04487898_10218 | Not Available | Negative | 628521 - 629996 | 53770.3 |
| hypothetical protein | SAMN04487898_10219 | Not Available | Positive | 630206 - 631480 | 48267.6 |
| putative porin | SAMN04487898_10220 | Not Available | Negative | 631477 - 633504 | 77847.1 |
| purine-nucleoside phosphorylase | SAMN04487898_10221 | Not Available | Negative | 633504 - 634319 | 29884.4 |
| lipid-a-disaccharide kinase | SAMN04487898_10222 | Not Available | Negative | 634291 - 635352 | 40112.9 |
| delta-1-pyrroline-5-carboxylate dehydrogenase | SAMN04487898_10223 | Not Available | Positive | 635406 - 637097 | 62200.4 |
| hypothetical protein | SAMN04487898_10224 | Not Available | Negative | 637211 - 637522 | 11401.7 |
| carbonic anhydrase | SAMN04487898_10225 | Not Available | Negative | 637571 - 638236 | 24388.3 |
| sulfate permease, sulp family | SAMN04487898_10226 | Not Available | Negative | 638243 - 639847 | 57403.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

