Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rdd family protein | SAMN04487898_121106 | Not Available | Negative | 5947051 - 5948835 | 69559.0 |
| de-hypoxanthine futalosine cyclase | SAMN04487898_121107 | Not Available | Negative | 5948926 - 5950131 | 45442.4 |
| predicted zn-dependent peptidase | SAMN04487898_121108 | Not Available | Positive | 5950165 - 5951409 | 47027.7 |
| predicted zn-dependent peptidase | SAMN04487898_121109 | Not Available | Positive | 5951402 - 5952676 | 47618.6 |
| protein of unknown function | SAMN04487898_121110 | Not Available | Negative | 5952689 - 5954584 | 71746.7 |
| protein of unknown function | SAMN04487898_121111 | Not Available | Negative | 5954584 - 5956584 | 76458.1 |
| outer membrane protein assembly factor bamb, contains pqq-like beta-propeller repeat | SAMN04487898_121112 | Not Available | Negative | 5956643 - 5958478 | 67378.7 |
| imp dehydrogenase | SAMN04487898_121113 | Not Available | Positive | 5958844 - 5960313 | 52376.5 |
| hypothetical protein | SAMN04487898_121114 | Not Available | Negative | 5960366 - 5961079 | 27431.8 |
| signal transduction histidine kinase | SAMN04487898_121115 | Not Available | Negative | 5961121 - 5963109 | 74696.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

