Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_12186 | Not Available | Negative | 5927657 - 5927872 | 8460.86 |
| lysyl-trna synthetase, class ii | SAMN04487898_12187 | Not Available | Negative | 5927958 - 5929679 | 65372.7 |
| long-chain acyl-coa synthetase | SAMN04487898_12188 | Not Available | Negative | 5929808 - 5931721 | 71774.2 |
| iron-sulfur cluster assembly protein | SAMN04487898_12189 | Not Available | Negative | 5931802 - 5932128 | 11867.8 |
| nitrogen fixation protein nifu | SAMN04487898_12190 | Not Available | Negative | 5932197 - 5932610 | 14936.8 |
| cysteine desulfurase iscs | SAMN04487898_12191 | Not Available | Negative | 5932669 - 5933880 | 44327.2 |
| methylmalonyl-coa epimerase | SAMN04487898_12192 | Not Available | Positive | 5933969 - 5934409 | 16285.9 |
| hypothetical protein | SAMN04487898_12193 | Not Available | Positive | 5934413 - 5934700 | 11066.2 |
| large subunit ribosomal protein l31 | SAMN04487898_12194 | Not Available | Positive | 5934796 - 5935044 | 9750.63 |
| udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase | SAMN04487898_12195 | Not Available | Positive | 5935115 - 5936290 | 43565.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

