Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_12176 | Not Available | Negative | 5917331 - 5918905 | 59572.4 |
| uncharacterized membrane protein ygdd, tmem256/duf423 family | SAMN04487898_12177 | Not Available | Positive | 5919016 - 5919402 | 13999.6 |
| replication restart dna helicase pria | SAMN04487898_12178 | Not Available | Positive | 5919405 - 5921879 | 94124.7 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN04487898_12179 | Not Available | Positive | 5921980 - 5922636 | 24619.7 |
| ssra-binding protein | SAMN04487898_12180 | Not Available | Negative | 5922643 - 5923092 | 17524.5 |
| manganese transport protein | SAMN04487898_12181 | Not Available | Negative | 5923116 - 5924987 | 68505.8 |
| iron (metal) dependent repressor, dtxr family | SAMN04487898_12182 | Not Available | Negative | 5924989 - 5925747 | 29046.4 |
| lrp/asnc family transcriptional regulator, leucine-responsive regulatory protein | SAMN04487898_12183 | Not Available | Positive | 5925780 - 5926250 | 17972.2 |
| uracil-dna glycosylase | SAMN04487898_12184 | Not Available | Negative | 5926305 - 5926982 | 25022.9 |
| hypothetical protein | SAMN04487898_12185 | Not Available | Positive | 5927073 - 5927612 | 20622.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

