Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large conductance mechanosensitive channel | SAMN04487898_12166 | Not Available | Positive | 5910612 - 5911043 | 15077.9 |
| cell wall-active antibiotics response 4tms yvqf | SAMN04487898_12167 | Not Available | Positive | 5911264 - 5912034 | 28426.7 |
| protein of unknown function | SAMN04487898_12168 | Not Available | Positive | 5912046 - 5912411 | 14004.4 |
| histidine kinase | SAMN04487898_12169 | Not Available | Positive | 5912408 - 5913454 | 39794.1 |
| two component transcriptional regulator, lyttr family | SAMN04487898_12170 | Not Available | Positive | 5913447 - 5914184 | 27702.8 |
| large subunit ribosomal protein l34 | SAMN04487898_12171 | Not Available | Positive | 5914297 - 5914455 | 6148.54 |
| ribonuclease p protein component | SAMN04487898_12172 | Not Available | Positive | 5914459 - 5914932 | 18361.7 |
| hypothetical protein | SAMN04487898_12173 | Not Available | Positive | 5914919 - 5915149 | 8635.71 |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | SAMN04487898_12174 | Not Available | Positive | 5915187 - 5915873 | 24598.7 |
| hypothetical protein | SAMN04487898_12175 | Not Available | Negative | 5915874 - 5917223 | 50556.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

