Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (r)-s-oxide reductase | SAMN04487898_12156 | Not Available | Positive | 5896481 - 5896984 | 18892.6 |
| chey chemotaxis protein or a chey-like rec (receiver) domain | SAMN04487898_12157 | Not Available | Negative | 5896995 - 5897405 | 15385.8 |
| response regulator receiver domain-containing protein | SAMN04487898_12158 | Not Available | Negative | 5897395 - 5898474 | 40952.7 |
| hypothetical protein | SAMN04487898_12159 | Not Available | Negative | 5898488 - 5900644 | 81732.3 |
| hypothetical protein | SAMN04487898_12160 | Not Available | Negative | 5900641 - 5901357 | 26065.6 |
| thif family protein | SAMN04487898_12161 | Not Available | Negative | 5901344 - 5903659 | 86745.0 |
| response regulator receiver domain-containing protein | SAMN04487898_12162 | Not Available | Positive | 5903778 - 5904233 | 17659.4 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04487898_12163 | Not Available | Positive | 5904260 - 5907778 | 128780.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04487898_12164 | Not Available | Positive | 5907780 - 5908799 | 37638.8 |
| rna polymerase, sigma 54 subunit, rpon/sigl | SAMN04487898_12165 | Not Available | Negative | 5908810 - 5910282 | 56795.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

