Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | SAMN04487898_12136 | Not Available | Negative | 5871455 - 5872123 | 26174.2 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04487898_12137 | Not Available | Negative | 5872120 - 5872941 | 31390.5 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN04487898_12138 | Not Available | Positive | 5873120 - 5873566 | 16687.0 |
| morn repeat-containing protein | SAMN04487898_12139 | Not Available | Positive | 5873603 - 5874967 | 50587.5 |
| zn-dependent amino-or carboxypeptidase, m28 family | SAMN04487898_12140 | Not Available | Negative | 5874968 - 5876650 | 61903.2 |
| transcriptional regulator, arsr family | SAMN04487898_12141 | Not Available | Positive | 5876811 - 5877110 | 11174.5 |
| 2,4-dienoyl-coa reductase | SAMN04487898_12142 | Not Available | Positive | 5877125 - 5878231 | 40526.0 |
| cytochrome c peroxidase | SAMN04487898_12143 | Not Available | Negative | 5878417 - 5880192 | 65991.9 |
| hypothetical protein | SAMN04487898_12144 | Not Available | Negative | 5880294 - 5881754 | 53457.6 |
| pas domain s-box-containing protein | SAMN04487898_12145 | Not Available | Negative | 5882039 - 5883586 | 58601.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

