Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_12116 | Not Available | Positive | 5851565 - 5852389 | 30346.0 |
| cytochrome c peroxidase | SAMN04487898_12117 | Not Available | Positive | 5852395 - 5853441 | 39140.8 |
| hypothetical protein | SAMN04487898_12118 | Not Available | Positive | 5853444 - 5854370 | 34030.8 |
| chromate transporter | SAMN04487898_12119 | Not Available | Positive | 5854673 - 5855800 | 40569.4 |
| hypothetical protein | SAMN04487898_12120 | Not Available | Negative | 5855786 - 5856586 | 29807.5 |
| uncharacterized zinc-type alcohol dehydrogenase-like protein | SAMN04487898_12121 | Not Available | Positive | 5856953 - 5857996 | 37784.5 |
| protein of unknown function | SAMN04487898_12122 | Not Available | Negative | 5858108 - 5858467 | 13547.2 |
| ribosome biogenesis gtpase | SAMN04487898_12123 | Not Available | Positive | 5858732 - 5859784 | 39604.3 |
| arac-type dna-binding protein | SAMN04487898_12124 | Not Available | Negative | 5859851 - 5860681 | 32226.3 |
| drug resistance transporter, emrb/qaca subfamily | SAMN04487898_12125 | Not Available | Positive | 5860775 - 5862358 | 56892.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

