Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_1027 | Not Available | Negative | 614666 - 615199 | 19087.2 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN04487898_1028 | Not Available | Negative | 615226 - 615687 | 16720.6 |
| hypothetical protein | SAMN04487898_1029 | Not Available | Negative | 615841 - 616278 | 15579.1 |
| starch-binding associating with outer membrane | SAMN04487898_10210 | Not Available | Negative | 616296 - 617963 | 62866.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_10211 | Not Available | Negative | 617968 - 621381 | 125025.0 |
| fecr family protein | SAMN04487898_10212 | Not Available | Negative | 621508 - 622671 | 42886.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_10213 | Not Available | Positive | 622837 - 623427 | 23358.8 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04487898_10214 | Not Available | Positive | 623590 - 624330 | 26065.8 |
| transcriptional regulator, laci family | SAMN04487898_10215 | Not Available | Negative | 624337 - 625350 | 37346.2 |
| solute:na+ symporter, sss family | SAMN04487898_10216 | Not Available | Negative | 625435 - 627111 | 60448.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

