Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hsp20 family protein | SAMN04487898_1216 | Not Available | Positive | 5843849 - 5844295 | 16802.8 |
| hypothetical protein | SAMN04487898_1217 | Not Available | Negative | 5844148 - 5844576 | 16365.8 |
| hypothetical protein | SAMN04487898_1218 | Not Available | Negative | 5844651 - 5845220 | 21549.2 |
| nadph:quinone reductase | SAMN04487898_1219 | Not Available | Negative | 5845247 - 5846278 | 37523.6 |
| transcriptional regulator, hxlr family | SAMN04487898_12110 | Not Available | Positive | 5846296 - 5846718 | 16155.0 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN04487898_12111 | Not Available | Positive | 5846761 - 5847462 | 27929.5 |
| thiol-disulfide isomerase or thioredoxin | SAMN04487898_12112 | Not Available | Negative | 5847463 - 5849046 | 62101.8 |
| hypothetical protein | SAMN04487898_12113 | Not Available | Positive | 5849106 - 5849489 | 14498.8 |
| hypothetical protein | SAMN04487898_12114 | Not Available | Positive | 5849662 - 5850444 | 28129.5 |
| cytochrome c peroxidase | SAMN04487898_12115 | Not Available | Positive | 5850449 - 5851528 | 39870.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

