Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ecf sigma factor | SAMN04487898_120105 | Not Available | Positive | 5835855 - 5836079 | 8940.72 |
| arac family transcriptional regulator | SAMN04487898_120106 | Not Available | Negative | 5836086 - 5837009 | 35368.5 |
| hypothetical protein | SAMN04487898_120107 | Not Available | Positive | 5837014 - 5837256 | 9700.01 |
| thiol-disulfide isomerase or thioredoxin | SAMN04487898_120108 | Not Available | Positive | 5837377 - 5838117 | 28274.4 |
| rna ligase | SAMN04487898_120109 | Not Available | Positive | 5838295 - 5839052 | 30017.0 |
| thiosulfate/3-mercaptopyruvate sulfurtransferase | SAMN04487898_1211 | Not Available | Negative | 5839293 - 5840123 | 30386.2 |
| hypothetical protein | SAMN04487898_1212 | Not Available | Negative | 5840269 - 5840916 | 24914.5 |
| hypothetical protein | SAMN04487898_1213 | Not Available | Positive | 5841103 - 5841972 | 33184.6 |
| predicted atpase | SAMN04487898_1214 | Not Available | Negative | 5841946 - 5842638 | 27359.9 |
| hypothetical protein | SAMN04487898_1215 | Not Available | Negative | 5842695 - 5843231 | 20786.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

