Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN04487898_12095 | Not Available | Positive | 5821955 - 5822869 | 34309.5 |
| arac-type dna-binding protein | SAMN04487898_12096 | Not Available | Positive | 5822975 - 5823850 | 33555.1 |
| mfs transporter, dha1 family, tetracycline resistance protein | SAMN04487898_12097 | Not Available | Positive | 5823910 - 5825169 | 45956.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_12098 | Not Available | Positive | 5825348 - 5825947 | 23279.6 |
| fecr family protein | SAMN04487898_12099 | Not Available | Positive | 5826043 - 5827236 | 44081.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_120100 | Not Available | Positive | 5827547 - 5830774 | 117966.0 |
| susd family protein | SAMN04487898_120101 | Not Available | Positive | 5830800 - 5832233 | 52784.0 |
| protein of unknown function | SAMN04487898_120102 | Not Available | Positive | 5832247 - 5832987 | 27826.2 |
| pkd-like family protein | SAMN04487898_120103 | Not Available | Positive | 5832995 - 5834419 | 53552.9 |
| thiol-disulfide isomerase or thioredoxin | SAMN04487898_120104 | Not Available | Positive | 5834425 - 5835600 | 43687.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

