Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04487898_12085 | Not Available | Positive | 5806193 - 5807092 | 32820.1 |
| beta-galactosidase | SAMN04487898_12086 | Not Available | Positive | 5807128 - 5810250 | 118464.0 |
| glycosyl hydrolases family 16 | SAMN04487898_12087 | Not Available | Positive | 5810264 - 5811127 | 33856.4 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN04487898_12088 | Not Available | Negative | 5811195 - 5812325 | 42170.7 |
| cobalt-zinc-cadmium resistance protein czca | SAMN04487898_12089 | Not Available | Negative | 5812337 - 5816686 | 159205.0 |
| hypothetical protein | SAMN04487898_12090 | Not Available | Negative | 5816785 - 5817102 | 12164.4 |
| hypothetical protein | SAMN04487898_12091 | Not Available | Positive | 5817520 - 5818059 | 20375.7 |
| dna alkylation repair enzyme | SAMN04487898_12092 | Not Available | Negative | 5818064 - 5818672 | 23614.1 |
| hypothetical protein | SAMN04487898_12093 | Not Available | Positive | 5818864 - 5820519 | 62193.7 |
| transcriptional regulator, tetr family | SAMN04487898_12094 | Not Available | Positive | 5821371 - 5821928 | 21066.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

