Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04487898_12065 | Not Available | Positive | 5771621 - 5772751 | 41828.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_12066 | Not Available | Positive | 5773054 - 5776290 | 120036.0 |
| susd family protein | SAMN04487898_12067 | Not Available | Positive | 5776303 - 5777712 | 52517.6 |
| protein of unknown function | SAMN04487898_12068 | Not Available | Positive | 5777730 - 5778437 | 25580.8 |
| pkd-like family protein | SAMN04487898_12069 | Not Available | Positive | 5778461 - 5779879 | 51924.6 |
| thiol-disulfide isomerase or thioredoxin | SAMN04487898_12070 | Not Available | Positive | 5779901 - 5781157 | 46558.4 |
| thiol-disulfide isomerase or thioredoxin | SAMN04487898_12071 | Not Available | Positive | 5781176 - 5782369 | 43807.8 |
| bnr repeat-like domain-containing protein | SAMN04487898_12072 | Not Available | Positive | 5782436 - 5783650 | 45629.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_12073 | Not Available | Positive | 5783711 - 5784307 | 22704.3 |
| fecr family protein | SAMN04487898_12074 | Not Available | Positive | 5784410 - 5785414 | 37514.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

