Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane fusion protein, multidrug efflux system | SAMN04487898_12025 | Not Available | Negative | 5731657 - 5732826 | 41783.2 |
| transcriptional regulator, tetr family | SAMN04487898_12026 | Not Available | Negative | 5732845 - 5733603 | 29507.9 |
| erythromycin esterase homolog | SAMN04487898_12027 | Not Available | Positive | 5733647 - 5734873 | 46424.5 |
| cytidylate kinase | SAMN04487898_12028 | Not Available | Negative | 5734884 - 5735561 | 25489.2 |
| ribosome-associated protein | SAMN04487898_12029 | Not Available | Positive | 5735643 - 5736053 | 15518.1 |
| hypothetical protein | SAMN04487898_12030 | Not Available | Negative | 5736076 - 5737029 | 35603.9 |
| hypothetical protein | SAMN04487898_12031 | Not Available | Negative | 5737098 - 5737598 | 17906.3 |
| atp-dependent lon protease | SAMN04487898_12032 | Not Available | Negative | 5737640 - 5740111 | 92156.9 |
| outer membrane lipoprotein | SAMN04487898_12033 | Not Available | Positive | 5740375 - 5741001 | 23673.3 |
| hypothetical protein | SAMN04487898_12034 | Not Available | Negative | 5741058 - 5741585 | 20351.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

