Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent deacetylase | SAMN04487898_101428 | Not Available | Negative | 606400 - 607089 | 25789.9 |
| hypothetical protein | SAMN04487898_101429 | Not Available | Positive | 607232 - 607744 | 19520.1 |
| biopolymer transport protein exbd | SAMN04487898_101430 | Not Available | Positive | 607829 - 608350 | 19053.2 |
| hypothetical protein | SAMN04487898_101431 | Not Available | Positive | 608395 - 608623 | 8547.52 |
| uncharacterized conserved protein ybcv, duf1398 family | SAMN04487898_1021 | Not Available | Positive | 608624 - 609091 | 17825.1 |
| beta-glucosidase | SAMN04487898_1022 | Not Available | Negative | 609099 - 610436 | 50448.3 |
| hypothetical protein | SAMN04487898_1023 | Not Available | Positive | 610599 - 612002 | 50660.8 |
| muts domain v | SAMN04487898_1024 | Not Available | Negative | 612018 - 613832 | 68648.3 |
| 23s rrna (pseudouridine1915-n3)-methyltransferase | SAMN04487898_1025 | Not Available | Positive | 613926 - 614399 | 18184.2 |
| hypothetical protein | SAMN04487898_1026 | Not Available | Positive | 614460 - 614588 | 5231.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

