Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small subunit ribosomal protein s1 | SAMN04487898_12015 | Not Available | Negative | 5716044 - 5717981 | 71763.1 |
| uncharacterized iron-regulated membrane protein | SAMN04487898_12016 | Not Available | Positive | 5718229 - 5719587 | 50376.5 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN04487898_12017 | Not Available | Negative | 5719568 - 5720542 | 36478.7 |
| uncharacterized iron-regulated membrane protein | SAMN04487898_12018 | Not Available | Negative | 5720626 - 5721771 | 43203.8 |
| iron complex outermembrane recepter protein | SAMN04487898_12019 | Not Available | Negative | 5721780 - 5724158 | 87859.5 |
| hypothetical protein | SAMN04487898_12020 | Not Available | Negative | 5724610 - 5724810 | 6692.29 |
| signal transduction histidine kinase | SAMN04487898_12021 | Not Available | Negative | 5724883 - 5726193 | 49975.1 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04487898_12022 | Not Available | Negative | 5726230 - 5726907 | 25811.2 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04487898_12023 | Not Available | Negative | 5727034 - 5728437 | 51234.9 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN04487898_12024 | Not Available | Negative | 5728448 - 5731624 | 114652.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

