Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate synthase / folylpolyglutamate synthase | SAMN04487898_1205 | Not Available | Negative | 5703054 - 5704370 | 48395.6 |
| hypothetical protein | SAMN04487898_1206 | Not Available | Negative | 5704381 - 5705199 | 28335.4 |
| biopolymer transport protein exbd | SAMN04487898_1207 | Not Available | Negative | 5705199 - 5705600 | 14920.5 |
| biopolymer transport protein exbb | SAMN04487898_1208 | Not Available | Negative | 5705600 - 5706310 | 25782.3 |
| sporulation related domain-containing protein | SAMN04487898_1209 | Not Available | Negative | 5706313 - 5707734 | 52010.7 |
| tonb dependent receptor | SAMN04487898_12010 | Not Available | Negative | 5707788 - 5709506 | 63331.3 |
| tetratricopeptide repeat-containing protein | SAMN04487898_12011 | Not Available | Negative | 5709518 - 5712535 | 115337.0 |
| aspartate carbamoyltransferase | SAMN04487898_12012 | Not Available | Negative | 5712705 - 5713637 | 34324.1 |
| pyrimidine operon attenuation protein / uracil phosphoribosyltransferase | SAMN04487898_12013 | Not Available | Negative | 5713639 - 5714187 | 20971.3 |
| hexosaminidase | SAMN04487898_12014 | Not Available | Negative | 5714344 - 5715960 | 61989.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

