Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-o-beta-d-mannosyl-d-glucose phosphorylase | SAMN04487898_119127 | Not Available | Negative | 5684036 - 5685208 | 43948.1 |
| na+/proline symporter | SAMN04487898_119128 | Not Available | Negative | 5685218 - 5687044 | 68409.3 |
| mannan endo-1,4-beta-mannosidase | SAMN04487898_119129 | Not Available | Negative | 5687046 - 5688185 | 43789.1 |
| hypothetical protein | SAMN04487898_119130 | Not Available | Negative | 5688195 - 5689220 | 36588.8 |
| starch-binding associating with outer membrane | SAMN04487898_119131 | Not Available | Negative | 5689258 - 5690907 | 60947.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_119132 | Not Available | Negative | 5690926 - 5694099 | 115808.0 |
| arac-type dna-binding protein | SAMN04487898_119133 | Not Available | Positive | 5694327 - 5695202 | 33794.7 |
| acyl-[acyl-carrier-protein] desaturase | SAMN04487898_1202 | Not Available | Positive | 5696657 - 5697637 | 37892.4 |
| methylmalonyl-coa mutase | SAMN04487898_1203 | Not Available | Negative | 5697714 - 5701106 | 126667.0 |
| type i phosphodiesterase / nucleotide pyrophosphatase | SAMN04487898_1204 | Not Available | Negative | 5701257 - 5702921 | 61706.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

