Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | SAMN04487898_119117 | Not Available | Positive | 5676285 - 5676968 | 26216.0 |
| hypothetical protein | SAMN04487898_119118 | Not Available | Positive | 5677005 - 5677220 | 8329.14 |
| carboxyl-terminal processing protease | SAMN04487898_119119 | Not Available | Positive | 5677296 - 5679005 | 63142.7 |
| ferredoxin, 2fe-2s | SAMN04487898_119120 | Not Available | Negative | 5679013 - 5679342 | 11945.3 |
| thioredoxin reductase (nadph) | SAMN04487898_119121 | Not Available | Negative | 5679345 - 5680355 | 36703.4 |
| udp-2,3-diacylglucosamine hydrolase | SAMN04487898_119122 | Not Available | Positive | 5680484 - 5681230 | 29098.9 |
| peptide chain release factor 1 | SAMN04487898_119123 | Not Available | Positive | 5681391 - 5682464 | 40243.0 |
| Trna-asp | Not Available | Not Available | Positive | 5682558 - 5682634 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 5682705 - 5682781 | Not Available |
| mannobiose 2-epimerase | SAMN04487898_119126 | Not Available | Negative | 5682849 - 5684039 | 46048.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

