Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04487898_119107 | Not Available | Positive | 5661360 - 5662127 | 27891.7 |
| transcriptional regulator, deor family | SAMN04487898_119108 | Not Available | Negative | 5662217 - 5662966 | 27466.5 |
| hypothetical protein | SAMN04487898_119109 | Not Available | Negative | 5663033 - 5663215 | 6929.38 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_119110 | Not Available | Positive | 5663314 - 5666346 | 110796.0 |
| starch-binding associating with outer membrane | SAMN04487898_119111 | Not Available | Positive | 5666364 - 5667905 | 58180.1 |
| hypothetical protein | SAMN04487898_119112 | Not Available | Positive | 5667911 - 5668696 | 28824.0 |
| pkd domain-containing protein | SAMN04487898_119113 | Not Available | Positive | 5668706 - 5670292 | 57005.7 |
| chitinase, gh18 family | SAMN04487898_119114 | Not Available | Positive | 5670317 - 5671354 | 37759.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_119115 | Not Available | Positive | 5671600 - 5674647 | 109584.0 |
| starch-binding associating with outer membrane | SAMN04487898_119116 | Not Available | Positive | 5674663 - 5676267 | 59427.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

