Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine synthetase | SAMN04487898_11997 | Not Available | Positive | 5644853 - 5646211 | 50785.8 |
| iron-containing alcohol dehydrogenase | SAMN04487898_11998 | Not Available | Positive | 5646232 - 5647380 | 41975.7 |
| putative glutamine amidotransferase | SAMN04487898_11999 | Not Available | Positive | 5647412 - 5648128 | 26874.8 |
| acyl-coa reductase | SAMN04487898_119100 | Not Available | Positive | 5648125 - 5649489 | 50458.5 |
| anhydro-n-acetylmuramic acid kinase | SAMN04487898_119101 | Not Available | Positive | 5649540 - 5650736 | 43406.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_119102 | Not Available | Positive | 5650817 - 5653987 | 113805.0 |
| starch-binding associating with outer membrane | SAMN04487898_119103 | Not Available | Positive | 5654040 - 5655332 | 46058.6 |
| transcriptional regulator, deor family | SAMN04487898_119104 | Not Available | Negative | 5655620 - 5656366 | 27350.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_119105 | Not Available | Positive | 5656637 - 5659732 | 111948.0 |
| starch-binding associating with outer membrane | SAMN04487898_119106 | Not Available | Positive | 5659743 - 5661341 | 60128.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

