Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | SAMN04487898_11987 | Not Available | Positive | 5628741 - 5629154 | 15833.7 |
| gtp cyclohydrolase i | SAMN04487898_11988 | Not Available | Positive | 5629164 - 5629796 | 23842.8 |
| [acyl-carrier-protein] s-malonyltransferase | SAMN04487898_11989 | Not Available | Positive | 5629825 - 5630703 | 31268.9 |
| hamp domain-containing protein | SAMN04487898_11990 | Not Available | Positive | 5630703 - 5634461 | 142996.0 |
| hypothetical protein | SAMN04487898_11991 | Not Available | Negative | 5634453 - 5635361 | 34121.8 |
| uncharacterized lipoprotein yddw, upf0748 family | SAMN04487898_11992 | Not Available | Positive | 5635539 - 5637095 | 59019.3 |
| zinc protease | SAMN04487898_11993 | Not Available | Negative | 5637170 - 5640034 | 106459.0 |
| predicted acyltransferase | SAMN04487898_11994 | Not Available | Negative | 5640133 - 5641290 | 42767.0 |
| glucosamine-6-phosphate deaminase | SAMN04487898_11995 | Not Available | Negative | 5641358 - 5643277 | 72326.4 |
| ethanolamine permease | SAMN04487898_11996 | Not Available | Positive | 5643540 - 5644856 | 47325.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

