Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase (nad+) | SAMN04487898_11977 | Not Available | Negative | 5619452 - 5620990 | 55253.2 |
| tetratricopeptide repeat-containing protein | SAMN04487898_11978 | Not Available | Positive | 5621274 - 5622677 | 54999.3 |
| phosphosulfolactate synthase | SAMN04487898_11979 | Not Available | Positive | 5622705 - 5623511 | 30429.6 |
| shikimate dehydrogenase | SAMN04487898_11980 | Not Available | Positive | 5623538 - 5624281 | 27949.6 |
| gliding motility-associated lipoprotein gldd | SAMN04487898_11981 | Not Available | Positive | 5624307 - 5624867 | 21963.8 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04487898_11982 | Not Available | Positive | 5624884 - 5625522 | 23851.3 |
| lipoprotein-releasing system permease protein | SAMN04487898_11983 | Not Available | Positive | 5625540 - 5626775 | 45778.5 |
| hypothetical protein | SAMN04487898_11984 | Not Available | Positive | 5626780 - 5627157 | 13986.8 |
| 1,4-dihydroxy-6-naphthoate synthase | SAMN04487898_11985 | Not Available | Negative | 5627154 - 5627999 | 31814.4 |
| futalosine hydrolase | SAMN04487898_11986 | Not Available | Negative | 5628034 - 5628666 | 22907.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

