Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indole-3-glycerol phosphate synthase | SAMN04487898_11967 | Not Available | Positive | 5609449 - 5610240 | 29028.1 |
| gtp-binding protein hflx | SAMN04487898_11968 | Not Available | Positive | 5610265 - 5611455 | 45530.0 |
| ribosome-binding factor a | SAMN04487898_11969 | Not Available | Positive | 5611474 - 5611851 | 14202.9 |
| tonb family c-terminal domain-containing protein | SAMN04487898_11970 | Not Available | Positive | 5611903 - 5612553 | 24658.6 |
| lipid kinase, yegs/rv2252/bmru family | SAMN04487898_11971 | Not Available | Negative | 5612569 - 5613444 | 32425.8 |
| phosphatidate phosphatase app1 | SAMN04487898_11972 | Not Available | Positive | 5613501 - 5614481 | 37832.3 |
| uncharacterized membrane protein yccf, duf307 family | SAMN04487898_11973 | Not Available | Negative | 5614486 - 5614854 | 13462.2 |
| leucyl/phenylalanyl-trna--protein transferase | SAMN04487898_11974 | Not Available | Positive | 5614969 - 5615604 | 23863.0 |
| helicase conserved c-terminal domain-containing protein | SAMN04487898_11975 | Not Available | Negative | 5615597 - 5618566 | 114720.0 |
| hypothetical protein | SAMN04487898_11976 | Not Available | Positive | 5618737 - 5619369 | 22928.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

