Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | SAMN04487898_11957 | Not Available | Positive | 5600323 - 5601462 | 41642.2 |
| lrp/asnc family transcriptional regulator, regulator for asna, asnc and gida | SAMN04487898_11958 | Not Available | Negative | 5601521 - 5601994 | 17895.9 |
| hypothetical protein | SAMN04487898_11959 | Not Available | Negative | 5602540 - 5602908 | 13757.4 |
| aldehyde dehydrogenase | SAMN04487898_11960 | Not Available | Negative | 5603003 - 5604508 | 55222.5 |
| arac-type dna-binding protein | SAMN04487898_11961 | Not Available | Positive | 5604693 - 5605607 | 34614.6 |
| uncharacterized conserved protein ydhg, yjbr/cyay-like superfamily, duf1801 family | SAMN04487898_11962 | Not Available | Negative | 5605597 - 5606007 | 15643.1 |
| acetyltransferase (gnat) domain | SAMN04487898_11963 | Not Available | Positive | 5606141 - 5606590 | 17010.8 |
| hypothetical protein | SAMN04487898_11964 | Not Available | Positive | 5606676 - 5607119 | 16436.7 |
| anthranilate synthase component 1 | SAMN04487898_11965 | Not Available | Positive | 5607451 - 5608857 | 53319.0 |
| anthranilate synthase component 2 | SAMN04487898_11966 | Not Available | Positive | 5608862 - 5609446 | 21749.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

