Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease g | SAMN04487898_11947 | Not Available | Negative | 5589914 - 5591464 | 58670.4 |
| tpr repeat-containing protein | SAMN04487898_11948 | Not Available | Negative | 5591718 - 5592587 | 31107.7 |
| dna-binding protein hu-beta | SAMN04487898_11949 | Not Available | Negative | 5592593 - 5592895 | 11090.6 |
| a/g-specific dna-adenine glycosylase | SAMN04487898_11950 | Not Available | Positive | 5593067 - 5594128 | 40929.9 |
| single-strand binding protein | SAMN04487898_11951 | Not Available | Positive | 5594132 - 5594560 | 15970.9 |
| glucosamine--fructose-6-phosphate aminotransferase (isomerizing) | SAMN04487898_11952 | Not Available | Negative | 5594612 - 5596450 | 67598.8 |
| protein of unknown function | SAMN04487898_11953 | Not Available | Negative | 5596534 - 5597991 | 52401.2 |
| starch synthase | SAMN04487898_11954 | Not Available | Negative | 5598015 - 5598839 | 31761.1 |
| pantoate--beta-alanine ligase | SAMN04487898_11955 | Not Available | Positive | 5598965 - 5599831 | 32124.3 |
| l-aspartate 1-decarboxylase | SAMN04487898_11956 | Not Available | Positive | 5599877 - 5600227 | 12956.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

