Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transmembrane secretion effector | SAMN04487898_11936 | Not Available | Negative | 5577208 - 5578482 | 46955.8 |
| thiamine-phosphate pyrophosphorylase | SAMN04487898_11937 | Not Available | Negative | 5578550 - 5579182 | 22930.3 |
| iron complex outermembrane recepter protein | SAMN04487898_11938 | Not Available | Negative | 5579209 - 5581659 | 91525.7 |
| nicotinamide-nucleotide adenylyltransferase, nadr type | SAMN04487898_11940 | Not Available | Negative | 5581914 - 5582444 | 20337.1 |
| nicotinamide mononucleotide transporter | SAMN04487898_11941 | Not Available | Negative | 5582428 - 5583042 | 23959.5 |
| hypothetical protein | SAMN04487898_11942 | Not Available | Positive | 5583177 - 5583488 | 10985.6 |
| carbamoyl-phosphate synthase large subunit | SAMN04487898_11943 | Not Available | Positive | 5583704 - 5586520 | 104499.0 |
| protein of unknown function | SAMN04487898_11944 | Not Available | Negative | 5586574 - 5587509 | 35171.4 |
| lema protein | SAMN04487898_11945 | Not Available | Negative | 5587509 - 5588066 | 20851.3 |
| dna repair protein rada/sms | SAMN04487898_11946 | Not Available | Negative | 5588384 - 5589760 | 50385.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

