Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein (putative transposase or invertase) | SAMN04487898_11926 | Not Available | Positive | 5569173 - 5569424 | 9168.67 |
| hypothetical protein | SAMN04487898_11927 | Not Available | Negative | 5569622 - 5569972 | 13701.2 |
| large subunit ribosomal protein l13 | SAMN04487898_11928 | Not Available | Positive | 5570197 - 5570640 | 16188.8 |
| small subunit ribosomal protein s9 | SAMN04487898_11929 | Not Available | Positive | 5570652 - 5571038 | 14240.5 |
| ssu ribosomal protein s2p | SAMN04487898_11930 | Not Available | Positive | 5571057 - 5571881 | 30464.9 |
| elongation factor ts | SAMN04487898_11931 | Not Available | Positive | 5571981 - 5572820 | 30043.8 |
| n-acetylglucosamine-6-phosphate deacetylase | SAMN04487898_11932 | Not Available | Positive | 5572906 - 5574012 | 40203.4 |
| uridylate kinase | SAMN04487898_11933 | Not Available | Positive | 5574051 - 5574758 | 25894.7 |
| ribosome recycling factor | SAMN04487898_11934 | Not Available | Positive | 5574800 - 5575363 | 20896.3 |
| atp-binding cassette, subfamily b | SAMN04487898_11935 | Not Available | Positive | 5575460 - 5577211 | 65406.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

