Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_11916 | Not Available | Positive | 5560750 - 5561718 | 37101.3 |
| membrane associated serine protease, rhomboid family | SAMN04487898_11917 | Not Available | Negative | 5561715 - 5562332 | 23310.0 |
| hypothetical protein | SAMN04487898_11918 | Not Available | Negative | 5562339 - 5563043 | 25817.7 |
| tripeptide aminopeptidase | SAMN04487898_11919 | Not Available | Positive | 5563111 - 5564364 | 45752.3 |
| methyltransferase domain-containing protein | SAMN04487898_11920 | Not Available | Negative | 5564379 - 5565080 | 26459.9 |
| metallo-beta-lactamase family protein | SAMN04487898_11921 | Not Available | Negative | 5565107 - 5566504 | 51804.1 |
| ytxh-like protein | SAMN04487898_11922 | Not Available | Negative | 5566514 - 5566720 | 7179.75 |
| hypothetical protein | SAMN04487898_11923 | Not Available | Negative | 5566842 - 5567261 | 15338.3 |
| hypothetical protein | SAMN04487898_11924 | Not Available | Positive | 5567903 - 5568190 | 11056.0 |
| conserved hypothetical protein (putative transposase or invertase) | SAMN04487898_11925 | Not Available | Positive | 5568544 - 5569176 | 24719.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

