Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-glucosidase, glycosyl hydrolase family gh31 | SAMN04487898_1196 | Not Available | Negative | 5549366 - 5553229 | 144218.0 |
| hypothetical protein | SAMN04487898_1197 | Not Available | Positive | 5553455 - 5553793 | 13137.8 |
| uncharacterized conserved protein, duf2252 family | SAMN04487898_1198 | Not Available | Negative | 5553790 - 5554995 | 46208.1 |
| putative mg2+ transporter-c (mgtc) family protein | SAMN04487898_1199 | Not Available | Negative | 5555011 - 5555664 | 24717.0 |
| thiamine pyrophosphokinase | SAMN04487898_11910 | Not Available | Positive | 5555793 - 5556356 | 21345.3 |
| l-amino acid n-acyltransferase ynca | SAMN04487898_11911 | Not Available | Positive | 5556353 - 5556847 | 18551.4 |
| peptidase family m28 | SAMN04487898_11912 | Not Available | Negative | 5556844 - 5557800 | 35194.9 |
| protein of unknown function | SAMN04487898_11913 | Not Available | Negative | 5557835 - 5558989 | 43674.5 |
| rhodanese-related sulfurtransferase | SAMN04487898_11914 | Not Available | Positive | 5559123 - 5559443 | 12010.4 |
| l-alanine-dl-glutamate epimerase | SAMN04487898_11915 | Not Available | Negative | 5559621 - 5560661 | 38370.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

