Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN04487898_11887 | Not Available | Negative | 5494735 - 5496501 | 65958.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_11888 | Not Available | Negative | 5496538 - 5499741 | 118081.0 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN04487898_11889 | Not Available | Negative | 5499774 - 5501285 | 54826.3 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN04487898_11890 | Not Available | Negative | 5501340 - 5503088 | 64033.6 |
| starch-binding associating with outer membrane | SAMN04487898_11891 | Not Available | Negative | 5503104 - 5504561 | 54242.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_11892 | Not Available | Negative | 5504581 - 5507904 | 122559.0 |
| fasciclin domain-containing protein | SAMN04487898_11893 | Not Available | Negative | 5507926 - 5510190 | 83424.7 |
| glycosyl hydrolases family 2, sugar binding domain | SAMN04487898_11894 | Not Available | Negative | 5510671 - 5513457 | 103646.0 |
| l-rhamnose mutarotase | SAMN04487898_11895 | Not Available | Negative | 5513461 - 5513772 | 11679.8 |
| alpha-glucosidase, glycosyl hydrolase family gh31 | SAMN04487898_11896 | Not Available | Negative | 5513779 - 5516229 | 91980.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

