Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin synthase sulfur carrier subunit | SAMN04487898_11867 | Not Available | Positive | 5467333 - 5467566 | 8782.62 |
| molybdopterin synthase catalytic subunit | SAMN04487898_11868 | Not Available | Positive | 5467568 - 5468035 | 17345.7 |
| molybdopterin-guanine dinucleotide biosynthesis protein a | SAMN04487898_11869 | Not Available | Positive | 5468032 - 5468607 | 21534.3 |
| hypothetical protein | SAMN04487898_11870 | Not Available | Positive | 5468604 - 5469014 | 14647.0 |
| crp/fnr family transcriptional regulator, anaerobic regulatory protein | SAMN04487898_11871 | Not Available | Negative | 5469020 - 5469706 | 25798.4 |
| hypothetical protein | SAMN04487898_11872 | Not Available | Negative | 5469781 - 5470287 | 18963.1 |
| iron complex outermembrane recepter protein | SAMN04487898_11873 | Not Available | Negative | 5470284 - 5472275 | 74332.3 |
| multiple antibiotic resistance protein | SAMN04487898_11874 | Not Available | Positive | 5472661 - 5473230 | 20564.2 |
| dna-binding transcriptional regulator, gntr family | SAMN04487898_11875 | Not Available | Negative | 5473232 - 5474356 | 42457.3 |
| alpha-l-arabinofuranosidase | SAMN04487898_11876 | Not Available | Positive | 5474454 - 5476463 | 75629.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

