Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein (putative transposase or invertase) | SAMN04487898_11847 | Not Available | Positive | 5440933 - 5441844 | 34830.8 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN04487898_11848 | Not Available | Negative | 5441870 - 5443321 | 52530.1 |
| k(+)-stimulated pyrophosphate-energized sodium pump | SAMN04487898_11849 | Not Available | Positive | 5443921 - 5446227 | 79930.6 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN04487898_11850 | Not Available | Positive | 5446405 - 5448111 | 61493.8 |
| hypothetical protein | SAMN04487898_11851 | Not Available | Negative | 5448189 - 5448422 | 8806.99 |
| hypothetical protein | SAMN04487898_11852 | Not Available | Positive | 5448425 - 5448577 | 5332.47 |
| carbonic anhydrase | SAMN04487898_11853 | Not Available | Negative | 5448549 - 5449196 | 23986.0 |
| uncharacterized membrane protein yqik, contains band7/phb/spfh domain | SAMN04487898_11854 | Not Available | Negative | 5449209 - 5451092 | 69337.4 |
| hypothetical protein | SAMN04487898_11855 | Not Available | Positive | 5451247 - 5452149 | 35292.9 |
| uroporphyrin-iii c-methyltransferase | SAMN04487898_11856 | Not Available | Negative | 5452140 - 5452877 | 26516.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

