Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lea14-like dessication related protein | SAMN04487898_11827 | Not Available | Positive | 5410888 - 5411352 | 17140.2 |
| peroxiredoxin | SAMN04487898_11828 | Not Available | Negative | 5411365 - 5413275 | 70893.9 |
| hypothetical protein | SAMN04487898_11829 | Not Available | Negative | 5413320 - 5414156 | 31594.8 |
| susd family protein | SAMN04487898_11830 | Not Available | Negative | 5414167 - 5415603 | 53882.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_11831 | Not Available | Negative | 5415613 - 5419188 | 131304.0 |
| peroxiredoxin | SAMN04487898_11832 | Not Available | Negative | 5419216 - 5420346 | 41062.3 |
| hypothetical protein | SAMN04487898_11833 | Not Available | Negative | 5420357 - 5422939 | 97164.6 |
| ahpc/tsa family protein | SAMN04487898_11834 | Not Available | Negative | 5422918 - 5424318 | 53935.3 |
| fecr family protein | SAMN04487898_11835 | Not Available | Negative | 5424418 - 5425566 | 43376.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_11836 | Not Available | Negative | 5425574 - 5426122 | 21432.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

