Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol-disulfide isomerase or thioredoxin | SAMN04487898_11817 | Not Available | Negative | 5397385 - 5398734 | 49920.5 |
| thiol-disulfide isomerase or thioredoxin | SAMN04487898_11818 | Not Available | Negative | 5398747 - 5400267 | 56274.4 |
| susd family protein | SAMN04487898_11819 | Not Available | Negative | 5400341 - 5401804 | 54944.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_11820 | Not Available | Negative | 5401817 - 5405428 | 133741.0 |
| fecr family protein | SAMN04487898_11821 | Not Available | Negative | 5405553 - 5406797 | 45962.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_11822 | Not Available | Positive | 5406912 - 5407502 | 22529.2 |
| hypothetical protein | SAMN04487898_11823 | Not Available | Negative | 5407521 - 5408063 | 20610.3 |
| ompa-ompf porin, oop family | SAMN04487898_11824 | Not Available | Negative | 5408164 - 5408691 | 18866.7 |
| peroxiredoxin | SAMN04487898_11825 | Not Available | Negative | 5408819 - 5409967 | 42248.3 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN04487898_11826 | Not Available | Negative | 5409986 - 5410750 | 30247.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

