Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain protein | SAMN04487898_1187 | Not Available | Negative | 5389048 - 5389392 | 12868.2 |
| pas domain s-box-containing protein | SAMN04487898_1188 | Not Available | Positive | 5389525 - 5390331 | 31291.1 |
| protein of unknown function | SAMN04487898_1189 | Not Available | Negative | 5390328 - 5390579 | 9242.23 |
| atp-independent rna helicase dbpa | SAMN04487898_11810 | Not Available | Negative | 5390581 - 5391888 | 48701.6 |
| hypothetical protein | SAMN04487898_11811 | Not Available | Negative | 5391915 - 5392133 | 8941.18 |
| hypothetical protein | SAMN04487898_11812 | Not Available | Positive | 5392351 - 5392824 | 17710.4 |
| protein of unknown function | SAMN04487898_11813 | Not Available | Negative | 5392825 - 5393430 | 22573.5 |
| putative beta-barrel porin-2, ompl-like. bbp2 | SAMN04487898_11814 | Not Available | Negative | 5393470 - 5394525 | 37298.8 |
| ammonium transporter | SAMN04487898_11815 | Not Available | Negative | 5394578 - 5395948 | 48612.2 |
| hypothetical protein | SAMN04487898_11816 | Not Available | Negative | 5396338 - 5397318 | 37310.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

