Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04487898_117149 | Not Available | Positive | 5360252 - 5361871 | 61241.3 |
| hypothetical protein | SAMN04487898_117150 | Not Available | Positive | 5361909 - 5362937 | 37218.4 |
| alpha-l-rhamnosidase n-terminal domain-containing protein | SAMN04487898_117151 | Not Available | Positive | 5362941 - 5365355 | 91465.2 |
| hypothetical protein | SAMN04487898_117152 | Not Available | Positive | 5365373 - 5366329 | 36186.6 |
| glycosyl hydrolase family 63 c-terminal domain-containing protein | SAMN04487898_117153 | Not Available | Positive | 5366354 - 5367694 | 51469.7 |
| lysophospholipase l1 | SAMN04487898_117154 | Not Available | Positive | 5367717 - 5368868 | 43679.9 |
| hypothetical protein | SAMN04487898_117155 | Not Available | Positive | 5368873 - 5369292 | 15832.4 |
| uncharacterized iron-regulated membrane protein | SAMN04487898_117156 | Not Available | Negative | 5369212 - 5370309 | 41693.6 |
| iron complex outermembrane recepter protein | SAMN04487898_117157 | Not Available | Negative | 5370309 - 5373002 | 98268.1 |
| fecr family protein | SAMN04487898_117158 | Not Available | Negative | 5373105 - 5374076 | 36997.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

