Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter, sss family | SAMN04487898_101398 | Not Available | Positive | 565927 - 567639 | 63253.3 |
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN04487898_101399 | Not Available | Negative | 567636 - 568448 | 30606.1 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN04487898_101400 | Not Available | Negative | 568470 - 568970 | 19198.5 |
| outer membrane receptor for ferrienterochelin and colicins | SAMN04487898_101401 | Not Available | Positive | 569040 - 571436 | 89958.8 |
| protein of unknown function | SAMN04487898_101402 | Not Available | Positive | 571441 - 572223 | 28566.2 |
| signal transduction histidine kinase | SAMN04487898_101403 | Not Available | Positive | 572279 - 573481 | 44549.0 |
| galactose mutarotase | SAMN04487898_101404 | Not Available | Negative | 573482 - 574348 | 33480.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_101405 | Not Available | Positive | 574607 - 575155 | 21364.8 |
| fecr family protein | SAMN04487898_101406 | Not Available | Positive | 575238 - 576227 | 37466.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_101407 | Not Available | Positive | 576404 - 579886 | 129870.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

